Here’s a comparison table of the main methods in process mining (as available in PM4Py) so you can see their differences at a glance:
Process Discovery Methods
| Method | 
Output Model | 
Pros | 
Cons | 
Best Use Case
 | 
| Alpha Miner | 
Petri Net | 
Simple, foundational, easy to explain | 
Very sensitive to noise/incomplete logs | 
Educational/demo purposes, very clean logs
 | 
| Heuristics Miner | 
Heuristics Net / Petri Net | 
Handles noise, considers frequency | 
May oversimplify rare behavior | 
Real-life logs with noise and high variability
 | 
| Inductive Miner | 
Petri Net / Process Tree / BPMN | 
Always produces sound models, block-structured | 
May abstract away some detail | 
General-purpose discovery, recommended default
 | 
| ILP Miner | 
Petri Net | 
Precise, mathematically grounded | 
Heavy computational cost | 
Small/medium logs where precision is critical
 | 
| DFG Discovery | 
Directly-Follows Graph | 
Very fast, intuitive visualization | 
Lacks formal semantics, not executable | 
Quick insights, dashboards
 | 
Conformance Checking Methods
| Method | 
Pros | 
Cons | 
Best Use Case
 | 
| Token-Based Replay | 
Fast, intuitive, easy to compute | 
Less precise, may misrepresent deviations | 
Quick conformance estimation
 | 
| Alignment-Based Checking | 
Very precise, finds optimal matches | 
Computationally expensive for large logs | 
Audit scenarios, compliance checking
 | 
| Log Skeleton | 
Lightweight, structural conformance | 
Not as expressive as Petri net alignments | 
Quick structural validation
 | 
Performance Analysis
| Technique | 
Pros | 
Cons | 
Best Use Case
 | 
| Sojourn / throughput times | 
Easy to interpret, highlights bottlenecks | 
Needs reliable timestamp data | 
Detecting slow activities
 | 
| Time annotations on arcs | 
Visual enrichment of models | 
Only as good as the log quality | 
Identifying bottlenecks in process paths
 | 
| Case duration analysis | 
Summarizes case lifetimes | 
Doesn’t explain internal causes | 
SLA monitoring
 | 
Other Techniques
| Method | 
Pros | 
Cons | 
Best Use Case
 | 
| Trace Variants Analysis | 
Simple, shows different execution paths | 
Can explode with many variants | 
Exploratory analysis
 | 
| Trace Clustering | 
Groups similar behaviors | 
Choice of clustering algorithm impacts results | 
Finding behavior patterns
 | 
| Predictive Monitoring (via ML) | 
Anticipates outcomes, remaining time | 
Needs feature engineering, external ML models | 
Predictive SLA, early-warning systems
 | 
Key Takeaway:
- If you want robust discovery → use Inductive Miner.
 
- If you need fast visualization → use DFG Discovery.
 
- For compliance checks → prefer Alignment-based Conformance.
 
- For real-life noisy data → Heuristics Miner is strong.